STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ67705.1Formyltetrahydrofolate deformylase. (294 aa)    
Predicted Functional Partners:
SFQ67696.1
Methenyltetrahydrofolate cyclohydrolase.
  
 
 0.957
SFQ61257.1
Glycine hydroxymethyltransferase.
  
 
 0.908
SFQ73427.1
Methenyltetrahydrofolate cyclohydrolase.
  
 
 0.905
SFQ10832.1
Phosphoribosylglycinamide formyltransferase-1.
 
  
0.806
SFQ28261.1
Dihydrofolate reductase.
    
 0.786
SFQ67669.1
N-methylglutamate dehydrogenase subunit C.
  
 
 0.783
SFQ04296.1
Formate dehydrogenase alpha subunit.
    
  0.757
SFQ67677.1
Sarcosine oxidase subunit gamma.
  
  
 0.754
SFQ67661.1
Sarcosine oxidase subunit delta.
  
    0.745
SFQ11445.1
Fumarase, class II.
    
  0.744
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.