STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ66265.1Helicase conserved C-terminal domain-containing protein. (1171 aa)    
Predicted Functional Partners:
SFQ46144.1
RNAse PH.
   
 0.995
SFQ10858.1
Ribonuclease D.
   
 0.993
SFQ44726.1
Ribonuclease D.
   
 0.993
SFQ38818.1
SSU ribosomal protein S5P.
    
  0.992
SFQ38962.1
SSU ribosomal protein S11P.
    
  0.992
SFQ34849.1
RNAse R.
   
 0.992
SFQ59804.1
SSU ribosomal protein S4P.
   
  0.990
SFQ38522.1
LSU ribosomal protein L4P.
    
  0.977
SFQ73250.1
SSU ribosomal protein S1P.
   
 0.977
SFQ38609.1
SSU ribosomal protein S3P.
   
   0.969
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.