STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ70812.1Transcriptional regulator, GntR family. (245 aa)    
Predicted Functional Partners:
SFQ70801.1
Uncharacterized conserved protein YgbK, DUF1537 family.
 
     0.827
SFQ68079.1
Transcriptional regulator, GntR family.
  
     0.751
SFQ70441.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.746
SFQ01129.1
Transcriptional regulator, GntR family.
  
  
 0.745
SFQ76504.1
Transcriptional regulator, GntR family.
  
  
 0.720
SFQ08244.1
Transcriptional regulator, GntR family.
  
  
 0.719
SFQ57587.1
Transcriptional regulator, GntR family.
  
  
 0.714
SFQ18931.1
Transcriptional regulator, GntR family.
  
  
 0.694
SFQ70785.1
4-hydroxy-tetrahydrodipicolinate synthase.
 
   
 0.664
SFQ45845.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.633
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.