STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ74662.1Uncharacterized conserved protein. (151 aa)    
Predicted Functional Partners:
SFQ74672.1
Peptidase family M23.
 
    0.886
SFQ74679.1
Protein SCO1/2.
 
     0.865
SFQ74694.1
Thioredoxin.
 
 
   0.854
SFQ74685.1
Hypothetical protein.
 
     0.844
SFQ74705.1
Disulfide bond formation protein DsbB.
 
     0.829
SFQ74713.1
Protein SCO1/2.
 
     0.808
SFQ74646.1
Signal peptidase II.
 
     0.791
SFQ74635.1
Apolipoprotein N-acyltransferase.
 
     0.789
SFQ74655.1
Zinc transporter, ZIP family.
       0.760
SFQ74721.1
Cu(I)-responsive transcriptional regulator.
 
     0.630
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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