STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ75689.15-dehydro-2-deoxygluconokinase. (640 aa)    
Predicted Functional Partners:
SFQ75725.1
5-deoxyglucuronate isomerase.
 
 0.999
SFQ75697.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase.
 
  
 0.992
SFQ75675.1
Predicted dehydrogenase.
 
 0.973
SFQ75705.1
2-keto-myo-inositol dehydratase.
 
 0.968
SFQ75638.1
Myo-inositol 2-dehydrogenase.
 
 
 0.910
SFQ75667.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  
 0.887
SFQ75648.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
  
 0.872
SFQ75659.1
Monosaccharide ABC transporter membrane protein, CUT2 family.
  
 0.842
SFQ65016.1
Transcriptional regulator, MarR family.
 
 
 0.788
SFQ54400.1
GMP synthase (glutamine-hydrolyzing).
  
 
 0.771
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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