STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ77295.1Type IV secretion system protein VirB2. (96 aa)    
Predicted Functional Partners:
SFQ77313.1
Type IV secretion system protein VirB4.
 
 
 0.988
SFQ77363.1
Type IV secretion system protein VirB9.
 
  
 0.978
SFQ77373.1
Type IV secretion system protein VirB10.
 
  
 0.978
SFQ77304.1
Type IV secretion system protein VirB3.
 
   
 0.967
SFQ77384.1
Type IV secretion system protein VirB11.
 
  
 0.967
SFQ77355.1
Type IV secretion system protein VirB8.
 
   
 0.959
SFQ77408.1
Type IV secretion system protein VirB6.
 
   
 0.959
SFQ77347.1
Type IV secretion system protein VirB5.
 
     0.951
SFQ77335.1
Transglycosylase SLT domain-containing protein.
 
   
 0.943
SFQ77279.1
Hypothetical protein.
 
     0.919
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.