STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ79489.1Protein of unknown function. (392 aa)    
Predicted Functional Partners:
SFQ79496.1
Hypothetical protein.
       0.705
SFQ79482.1
Hypothetical protein.
       0.618
SFQ48464.1
Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03.
  
 
  0.568
SFQ34869.1
Glutathione S-transferase.
  
  
 0.535
SFQ79502.1
Hypothetical protein.
       0.505
SFQ71755.1
Glutathione peroxidase.
    
  0.486
SFQ35307.1
Hypothetical protein.
  
     0.483
SFQ25905.1
SSU ribosomal protein S6P modification protein.
    
  0.464
SFQ40924.1
Glutathione synthase.
    
  0.464
SFQ79521.1
Hypothetical protein.
       0.428
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.