SFQ79800.1 protein (Donghicola eburneus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

SFQ79800.1

Transposase. (482 aa)

Predicted Functional Partners:

SFQ71372.1

0.973

SFQ78802.1

0.973

SFQ79806.1

0.905

SFQ79810.1

0.826

SFQ80612.1

0.782

SFQ80240.1

0.773

SFQ80725.1

0.773

SFQ79218.1

0.768

SFQ78795.1

0.748

SFQ80658.1

0.623

Your Current Organism:

Donghicola eburneus

NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFQ71372.1	SFQ78795.1	SAMN05421764_111102	SAMN05421764_12417	IS66 C-terminal element.	IS66 C-terminal element.	0.497
SFQ71372.1	SFQ79218.1	SAMN05421764_111102	SAMN05421764_12714	IS66 C-terminal element.	Transposase.	0.699
SFQ71372.1	SFQ79800.1	SAMN05421764_111102	SAMN05421764_1333	IS66 C-terminal element.	Transposase.	0.973
SFQ71372.1	SFQ79806.1	SAMN05421764_111102	SAMN05421764_1334	IS66 C-terminal element.	Transposase.	0.503
SFQ71372.1	SFQ80725.1	SAMN05421764_111102	SAMN05421764_1482	IS66 C-terminal element.	Transposase.	0.690
SFQ78795.1	SFQ71372.1	SAMN05421764_12417	SAMN05421764_111102	IS66 C-terminal element.	IS66 C-terminal element.	0.497
SFQ78795.1	SFQ78802.1	SAMN05421764_12417	SAMN05421764_12418	IS66 C-terminal element.	IS66 C-terminal element.	0.679
SFQ78795.1	SFQ79218.1	SAMN05421764_12417	SAMN05421764_12714	IS66 C-terminal element.	Transposase.	0.460
SFQ78795.1	SFQ79800.1	SAMN05421764_12417	SAMN05421764_1333	IS66 C-terminal element.	Transposase.	0.748
SFQ78795.1	SFQ79806.1	SAMN05421764_12417	SAMN05421764_1334	IS66 C-terminal element.	Transposase.	0.454
SFQ78795.1	SFQ80240.1	SAMN05421764_12417	SAMN05421764_1381	IS66 C-terminal element.	Transposase.	0.502
SFQ78795.1	SFQ80612.1	SAMN05421764_12417	SAMN05421764_1452	IS66 C-terminal element.	Transposase.	0.619
SFQ78795.1	SFQ80725.1	SAMN05421764_12417	SAMN05421764_1482	IS66 C-terminal element.	Transposase.	0.406
SFQ78802.1	SFQ78795.1	SAMN05421764_12418	SAMN05421764_12417	IS66 C-terminal element.	IS66 C-terminal element.	0.679
SFQ78802.1	SFQ79218.1	SAMN05421764_12418	SAMN05421764_12714	IS66 C-terminal element.	Transposase.	0.699
SFQ78802.1	SFQ79800.1	SAMN05421764_12418	SAMN05421764_1333	IS66 C-terminal element.	Transposase.	0.973
SFQ78802.1	SFQ79806.1	SAMN05421764_12418	SAMN05421764_1334	IS66 C-terminal element.	Transposase.	0.503
SFQ78802.1	SFQ80725.1	SAMN05421764_12418	SAMN05421764_1482	IS66 C-terminal element.	Transposase.	0.690
SFQ79218.1	SFQ71372.1	SAMN05421764_12714	SAMN05421764_111102	Transposase.	IS66 C-terminal element.	0.699
SFQ79218.1	SFQ78795.1	SAMN05421764_12714	SAMN05421764_12417	Transposase.	IS66 C-terminal element.	0.460