STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znuCHigh-affinity zinc uptake system atp-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system (252 aa)    
Predicted Functional Partners:
znuB
annotation not available
 0.999
znuA
annotation not available
 
 
 0.998
YE3853
Fur family transcriptional regulator, zinc uptake regulator; Belongs to the Fur family
  
  
 0.671
YE1898
annotation not available
 
 0.637
YE1897
annotation not available
 
 0.628
YE2387
annotation not available
  
    0.576
YE3110
Zinc/manganese transport system permease protein; Similar to Neisseria meningitidis putative ABC-transporter membrane protein NMA0790 SWALL:Q9JVL3 (EMBL:AL162754) (291 aa) fasta scores: E(): 2.5e-53,56.07 38d in 280 aa, and to Rhizobium loti ABC transporter, permease protein MLL8314 SWALL:Q983I6 (EMBL:AP003013) (291 aa) fasta scores: E(): 3.7e-53,58.18 38d in 275 aa
 
 
 0.550
msbB
Lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A
 
    0.496
zntB
Cora-like mg2+ transporter protein; Mediates efflux of zinc ions
 
   
 0.480
YE3895
annotation not available
      
 0.416
Your Current Organism:
Yersinia enterocolitica 8081
NCBI taxonomy Id: 393305
Other names: Y. enterocolitica subsp. enterocolitica 8081, Yersinia enterocolitica subsp. enterocolitica 8081, Yersinia enterocolitica subsp. enterocolitica str. 8081, Yersinia enterocolitica subsp. enterocolitica strain 8081
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