STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdpBPotassium-transporting atpase atp-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system (688 aa)    
Predicted Functional Partners:
kdpA
Potassium-transporting atpase potassium-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
 
 0.999
kdpC
Putative potassium-transporting atpase c chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex
 
 0.999
kdpD
annotation not available
 
 0.989
kdpE
annotation not available
  
 0.917
btuB
Vitamin b12/cobalamin outer membrane transporter; Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans- periplasmic membrane protein TonB
   
  
 0.711
YE3585
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
   
    0.707
YE1527
annotation not available
   
    0.673
recR
Recombination protein recr; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
   
    0.673
potI
annotation not available
   
    0.672
feoB
Ferrous iron transport protein b; Probable transporter of a GTP-driven Fe(2+) uptake system
   
    0.669
Your Current Organism:
Yersinia enterocolitica 8081
NCBI taxonomy Id: 393305
Other names: Y. enterocolitica subsp. enterocolitica 8081, Yersinia enterocolitica subsp. enterocolitica 8081, Yersinia enterocolitica subsp. enterocolitica str. 8081, Yersinia enterocolitica subsp. enterocolitica strain 8081
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