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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagDNA-3-methyladenine glycosidase I; Identified by sequencesimilarity; putative InterPro: DNA-3-methyladenine glycosylase I; High confidence in function and specificity. (192 aa)    
Predicted Functional Partners:
guaA-2
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
      0.723
ABO_1265
Oxidoreductase (acting on the CH-OH group of donors) InterPro: Short-chain dehydrogenase/reductase (SDR) superfamily; Family membership; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
      0.551
glyS
(glycyl-tRNA synthetase tetrameric type betasubunit) identified by match to TIGR protein family HMMTIGR00211 InterPro: Glycyl-tRNA synthetase beta subunit; High confidence in function and specificity.
       0.542
glyQ
(glycyl-tRNA synthetase tetrameric type alphasubunit) identified by sequence similarity; putative InterPro: Glycyl-tRNA synthetase alpha subunit; High confidence in function and specificity.
       0.542
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.524
mutY
A/G specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
    
 0.412
ABO_0007
Histidinol-phosphatase, putatitve; Identified by sequence similarity; putative identified by match to TIGRFAM protein family HMMTIGR00213; Function unclear.
       0.400
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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