Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABO_0061 | ABO_1784 | ABO_0061 | ABO_1784 | Zinc-containing 'long-chain' alcohol dehydrogenases identified by sequencesimilarity; putative; Family membership. | Non-ribosomal peptide synthase fragment, contains condensation, fatty-acid-CoA ligase and thioesterase domains. identified by sequence similarity; putative InterPro: AMP-dependent synthetase and ligase; Family membership. | 0.435 |
ABO_0061 | AKR1A1 | ABO_0061 | ABO_2414 | Zinc-containing 'long-chain' alcohol dehydrogenases identified by sequencesimilarity; putative; Family membership. | (oxidoreductase aldo/keto reductase family) identified by match to TIGR protein family HMMTIGR01293 InterPro: Aldo/keto reductase family; Family membership. | 0.514 |
ABO_0061 | aldH | ABO_0061 | ABO_0087 | Zinc-containing 'long-chain' alcohol dehydrogenases identified by sequencesimilarity; putative; Family membership. | Alcanivorax borkumensis aldehyde dehydrogenase,; Specificity unclear; Belongs to the aldehyde dehydrogenase family. | 0.453 |
ABO_0061 | aldh1 | ABO_0061 | ABO_0962 | Zinc-containing 'long-chain' alcohol dehydrogenases identified by sequencesimilarity; putative; Family membership. | Identified by match to TIGR protein family HMMTIGR01722 InterPro: Aldehyde dehydrogenase family; Specificity unclear. | 0.455 |
ABO_0061 | p450-2 | ABO_0061 | ABO_2288 | Zinc-containing 'long-chain' alcohol dehydrogenases identified by sequencesimilarity; putative; Family membership. | P450, cytochrome p450 (conserved hypothetical protein) very GP:2588989; identified by sequencesimilarity; High confidence in function and specificity. | 0.401 |
ABO_1784 | ABO_0061 | ABO_1784 | ABO_0061 | Non-ribosomal peptide synthase fragment, contains condensation, fatty-acid-CoA ligase and thioesterase domains. identified by sequence similarity; putative InterPro: AMP-dependent synthetase and ligase; Family membership. | Zinc-containing 'long-chain' alcohol dehydrogenases identified by sequencesimilarity; putative; Family membership. | 0.435 |
ABO_1784 | p450-2 | ABO_1784 | ABO_2288 | Non-ribosomal peptide synthase fragment, contains condensation, fatty-acid-CoA ligase and thioesterase domains. identified by sequence similarity; putative InterPro: AMP-dependent synthetase and ligase; Family membership. | P450, cytochrome p450 (conserved hypothetical protein) very GP:2588989; identified by sequencesimilarity; High confidence in function and specificity. | 0.966 |
AKR1A1 | ABO_0061 | ABO_2414 | ABO_0061 | (oxidoreductase aldo/keto reductase family) identified by match to TIGR protein family HMMTIGR01293 InterPro: Aldo/keto reductase family; Family membership. | Zinc-containing 'long-chain' alcohol dehydrogenases identified by sequencesimilarity; putative; Family membership. | 0.514 |
AKR1A1 | aldh1 | ABO_2414 | ABO_0962 | (oxidoreductase aldo/keto reductase family) identified by match to TIGR protein family HMMTIGR01293 InterPro: Aldo/keto reductase family; Family membership. | Identified by match to TIGR protein family HMMTIGR01722 InterPro: Aldehyde dehydrogenase family; Specificity unclear. | 0.944 |
aldH | ABO_0061 | ABO_0087 | ABO_0061 | Alcanivorax borkumensis aldehyde dehydrogenase,; Specificity unclear; Belongs to the aldehyde dehydrogenase family. | Zinc-containing 'long-chain' alcohol dehydrogenases identified by sequencesimilarity; putative; Family membership. | 0.453 |
aldh1 | ABO_0061 | ABO_0962 | ABO_0061 | Identified by match to TIGR protein family HMMTIGR01722 InterPro: Aldehyde dehydrogenase family; Specificity unclear. | Zinc-containing 'long-chain' alcohol dehydrogenases identified by sequencesimilarity; putative; Family membership. | 0.455 |
aldh1 | AKR1A1 | ABO_0962 | ABO_2414 | Identified by match to TIGR protein family HMMTIGR01722 InterPro: Aldehyde dehydrogenase family; Specificity unclear. | (oxidoreductase aldo/keto reductase family) identified by match to TIGR protein family HMMTIGR01293 InterPro: Aldo/keto reductase family; Family membership. | 0.944 |
p450-2 | ABO_0061 | ABO_2288 | ABO_0061 | P450, cytochrome p450 (conserved hypothetical protein) very GP:2588989; identified by sequencesimilarity; High confidence in function and specificity. | Zinc-containing 'long-chain' alcohol dehydrogenases identified by sequencesimilarity; putative; Family membership. | 0.401 |
p450-2 | ABO_1784 | ABO_2288 | ABO_1784 | P450, cytochrome p450 (conserved hypothetical protein) very GP:2588989; identified by sequencesimilarity; High confidence in function and specificity. | Non-ribosomal peptide synthase fragment, contains condensation, fatty-acid-CoA ligase and thioesterase domains. identified by sequence similarity; putative InterPro: AMP-dependent synthetase and ligase; Family membership. | 0.966 |