STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_0097Membrane protein, putative. (157 aa)    
Predicted Functional Partners:
ABO_0096
SPFH domain/Band 7 family protein identified by sequence similarity; putative InterPro: Band 7 protein; Family membership.
 
 
 0.969
cobS
Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate.; Belongs to the CobS family.
   
    0.766
hflK
Protease subunit HflK; HflC and HflK could encode or regulate a protease.
 
 
 0.609
ABO_0098
(slyD) (peptidyl-prolyl cis-trans isomerase FKBP-type) identified by sequence similarity; putative InterPro: FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase); Specificity unclear.
       0.437
hflC
Protease subunit HflC; HflC and HflK could regulate a protease.
  
 
 0.426
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
Server load: medium (42%) [HD]