Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_0189Oxidoreductase short chaindehydrogenase/reductase family identified by sequence similarity; putative InterPro: Short-chain dehydrogenase/reductase (SDR) superfamily; Family membership; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (288 aa)    
Predicted Functional Partners:
ABO_0190
Monooxygenase, putative; (monooxygenase flavin-binding family) identified by sequence similarity; putative InterPro: Flavin-containing monooxygenase (FMO); Family membership.
     0.888
ABO_1784
Non-ribosomal peptide synthase fragment, contains condensation, fatty-acid-CoA ligase and thioesterase domains. identified by sequence similarity; putative InterPro: AMP-dependent synthetase and ligase; Family membership.
 
  
 0.861
ABO_0191
Hydrolase, alpha/beta fold family; Identified by match to TIGR protein family HMMTIGR01738 InterPro: Alpha/beta hydrolase fold; Family membership.
 
     0.824
ABO_0188
Predicted metal-dependent hydrolase; conserved hypothetical protein.
 
     0.819
ABO_2480
Conserved hypothetical protein.
  
     0.564
ABO_1026
Oxidoreductase (short-chaindehydrogenase/reductase family) identified by match to PFAM protein family HMMPF00106; Family membership.
  
 
   0.546
ABO_0282
Monooxygenase flavin-binding family identified by sequence similarity; putative InterPro: Flavin-containing monooxygenase (FMO); Family membership.
     0.528
ABO_0961
Conserved hypothetical protein; Predicted metal-dependent hydrolase.
  
     0.523
ABO_0663
Oxidoreductase (acting on the CH-OH group of donors with NAD+ or NADP+ as acceptor) identified by sequencesimilarity; putative InterPro: Short-chain dehydrogenase/reductase (SDR) superfamily; Family membership.
  
 
   0.520
ABO_0181
Conserved hypothetical protein; Predicted metal-dependent hydrolase.
  
     0.495
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.