| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABO_0254 | ABO_0255 | ABO_0254 | ABO_0255 | (ABC transporter ATP-binding protein, permease, putative) identified by sequencesimilarity; putative InterPro: AAA ATPase superfamily; Family membership. | Conserved hypothetical protein. | 0.591 |
| ABO_0254 | rplD | ABO_0254 | ABO_0398 | (ABC transporter ATP-binding protein, permease, putative) identified by sequencesimilarity; putative InterPro: AAA ATPase superfamily; Family membership. | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.547 |
| ABO_0254 | rplF | ABO_0254 | ABO_0412 | (ABC transporter ATP-binding protein, permease, putative) identified by sequencesimilarity; putative InterPro: AAA ATPase superfamily; Family membership. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.607 |
| ABO_0254 | rplM | ABO_0254 | ABO_0576 | (ABC transporter ATP-binding protein, permease, putative) identified by sequencesimilarity; putative InterPro: AAA ATPase superfamily; Family membership. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.539 |
| ABO_0254 | rplT | ABO_0254 | ABO_1839 | (ABC transporter ATP-binding protein, permease, putative) identified by sequencesimilarity; putative InterPro: AAA ATPase superfamily; Family membership. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.548 |
| ABO_0254 | rplU | ABO_0254 | ABO_0452 | (ABC transporter ATP-binding protein, permease, putative) identified by sequencesimilarity; putative InterPro: AAA ATPase superfamily; Family membership. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.551 |
| ABO_0254 | rpsC | ABO_0254 | ABO_0403 | (ABC transporter ATP-binding protein, permease, putative) identified by sequencesimilarity; putative InterPro: AAA ATPase superfamily; Family membership. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.540 |
| ABO_0254 | rpsG | ABO_0254 | ABO_0381 | (ABC transporter ATP-binding protein, permease, putative) identified by sequencesimilarity; putative InterPro: AAA ATPase superfamily; Family membership. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.537 |
| ABO_0254 | rpsO | ABO_0254 | ABO_0332 | (ABC transporter ATP-binding protein, permease, putative) identified by sequencesimilarity; putative InterPro: AAA ATPase superfamily; Family membership. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.535 |
| ABO_0254 | ychF | ABO_0254 | ABO_0515 | (ABC transporter ATP-binding protein, permease, putative) identified by sequencesimilarity; putative InterPro: AAA ATPase superfamily; Family membership. | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.549 |
| ABO_0255 | ABO_0254 | ABO_0255 | ABO_0254 | Conserved hypothetical protein. | (ABC transporter ATP-binding protein, permease, putative) identified by sequencesimilarity; putative InterPro: AAA ATPase superfamily; Family membership. | 0.591 |
| rplD | ABO_0254 | ABO_0398 | ABO_0254 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | (ABC transporter ATP-binding protein, permease, putative) identified by sequencesimilarity; putative InterPro: AAA ATPase superfamily; Family membership. | 0.547 |
| rplD | rplF | ABO_0398 | ABO_0412 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.999 |
| rplD | rplM | ABO_0398 | ABO_0576 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
| rplD | rplT | ABO_0398 | ABO_1839 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.994 |
| rplD | rplU | ABO_0398 | ABO_0452 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.992 |
| rplD | rpsC | ABO_0398 | ABO_0403 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
| rplD | rpsG | ABO_0398 | ABO_0381 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
| rplD | rpsO | ABO_0398 | ABO_0332 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.994 |
| rplD | ychF | ABO_0398 | ABO_0515 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.636 |
