STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_0285Transcriptional regulator TetR family identified by sequencesimilarity; putative InterPro: Bacterial regulatory proteins TetR family; Family membership. (215 aa)    
Predicted Functional Partners:
ABO_0286
Oxidoreductase (short chaindehydrogenase/reductase family) identified by match to TIGR protein family HMMTIGR01500 InterPro: Short-chain dehydrogenase/reductase (SDR) superfamily; Family membership; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.680
ABO_0284
Hypothetical protein.
       0.608
ABO_0287
Conserved hypothetical protein.
       0.541
ABO_2546
(fatty acid desaturase, putative) identified by sequencesimilarity; putative InterPro: Fatty acid desaturase type 2; High confidence in function and specificity.
  
    0.496
ABO_0809
Conserved hypothetical protein; Identified by sequence similarity; putative.
  
   
 0.475
ABO_0288
Monooxygenase flavin-binding family identified by sequence similarity; putative InterPro: Flavin-containing monooxygenase (FMO); Function unclear.
 
     0.468
ABO_2697
Hypothetical protein.
  
     0.445
ABO_2480
Conserved hypothetical protein.
  
     0.434
ABO_2116
(transcriptional regulator, putative) identified by match to PFAM protein family HMMPF03466 InterPro: NodD transcription activator carboxyl terminal region,Bacterial regulatory protein, LysR family HTH reporting nucleic acid binding motif; Family membership.
  
 
   0.425
ABO_0181
Conserved hypothetical protein; Predicted metal-dependent hydrolase.
  
     0.421
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.