STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_0300Conserved hypothetical protein. (409 aa)    
Predicted Functional Partners:
dhmA
Haloallkane dehalogenase; belongs to the haloalkane dehalogenase family. subfamily 1; High confidence in function and specificity.
 
     0.548
ABO_1716
Conserved hypothetical protein.
  
     0.545
atfA2
Acyltransferase, homologous to ABO_2742, AtfA1 and to the ACIAD0832, wax ester synthase/ diacylglycerol acyltransferase of Acinetobacter sp. AP1; High confidence in function and specificity.
  
     0.540
ABO_2410
Conserved hypothetical protein, contains Esterase/lipase/thioesterase family active site (InterPro).
  
     0.526
atfA1
Acyltransferase, homologous to ABO_1804, AtfA2 and to the ACIAD0832, wax ester synthase/ diacylglycerol acyltransferase of Acinetobacter sp. AP1; High confidence in function and specificity.
  
     0.484
ABO_0282
Monooxygenase flavin-binding family identified by sequence similarity; putative InterPro: Flavin-containing monooxygenase (FMO); Family membership.
  
     0.473
ABO_0190
Monooxygenase, putative; (monooxygenase flavin-binding family) identified by sequence similarity; putative InterPro: Flavin-containing monooxygenase (FMO); Family membership.
  
     0.459
p450-3
(cytochrome P450, putative) identified by sequencesimilarity; putative InterPro: Cytochrome P450 enzyme; High confidence in function and specificity.
  
   
 0.429
cobB
Identified by match to PFAM protein family HMMPF02146 InterPro: Sir2 family; High confidence in function and specificity; Belongs to the sirtuin family. Class III subfamily.
 
 
    0.426
ABO_0301
Conserved hypothetical protein.
       0.421
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.