rnfH protein (Alcanivorax borkumensis) - STRING interaction network

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Score

rnfH

Conserved hypothetical protein; Belongs to the UPF0125 (RnfH) family. (104 aa)

Predicted Functional Partners:

ABO_0306

0.869

rnfB

0.808

rnfG

0.760

rnfE

0.635

rnfC

0.613

smpB

0.610

rnfD

0.604

rnfA

0.526

algM

0.478

Your Current Organism:

Alcanivorax borkumensis

NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABO_0306	rnfH	ABO_0306	ABO_0307	Na+-dependent transporters of the SNF family similar pst:PSPTO4514; Family membership; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	Conserved hypothetical protein; Belongs to the UPF0125 (RnfH) family.	0.869
ABO_0306	smpB	ABO_0306	ABO_0305	Na+-dependent transporters of the SNF family similar pst:PSPTO4514; Family membership; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	ssrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]	0.610
algM	rnfA	ABO_1636	ABO_1609	AlgM protein; Identified by sequence similarity; putative; High confidence in function and specificity.	Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	0.619
algM	rnfB	ABO_1636	ABO_1610	AlgM protein; Identified by sequence similarity; putative; High confidence in function and specificity.	Electron transport complex protein rnfB, putative; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	0.603
algM	rnfC	ABO_1636	ABO_1611	AlgM protein; Identified by sequence similarity; putative; High confidence in function and specificity.	Electron transport complex protein rnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.	0.707
algM	rnfD	ABO_1636	ABO_1612	AlgM protein; Identified by sequence similarity; putative; High confidence in function and specificity.	Electron transport complex protein rnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	0.676
algM	rnfE	ABO_1636	ABO_1614	AlgM protein; Identified by sequence similarity; putative; High confidence in function and specificity.	Electron transport complex protein rnfE, putative; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	0.695
algM	rnfG	ABO_1636	ABO_1613	AlgM protein; Identified by sequence similarity; putative; High confidence in function and specificity.	Electron complex protein rnfG, putative; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.	0.774
algM	rnfH	ABO_1636	ABO_0307	AlgM protein; Identified by sequence similarity; putative; High confidence in function and specificity.	Conserved hypothetical protein; Belongs to the UPF0125 (RnfH) family.	0.478
rnfA	algM	ABO_1609	ABO_1636	Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	AlgM protein; Identified by sequence similarity; putative; High confidence in function and specificity.	0.619
rnfA	rnfB	ABO_1609	ABO_1610	Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex protein rnfB, putative; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	0.995
rnfA	rnfC	ABO_1609	ABO_1611	Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex protein rnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.	0.991
rnfA	rnfD	ABO_1609	ABO_1612	Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex protein rnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	0.981
rnfA	rnfE	ABO_1609	ABO_1614	Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex protein rnfE, putative; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	0.948
rnfA	rnfG	ABO_1609	ABO_1613	Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron complex protein rnfG, putative; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.	0.976
rnfA	rnfH	ABO_1609	ABO_0307	Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Conserved hypothetical protein; Belongs to the UPF0125 (RnfH) family.	0.526
rnfB	algM	ABO_1610	ABO_1636	Electron transport complex protein rnfB, putative; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	AlgM protein; Identified by sequence similarity; putative; High confidence in function and specificity.	0.603
rnfB	rnfA	ABO_1610	ABO_1609	Electron transport complex protein rnfB, putative; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	0.995
rnfB	rnfC	ABO_1610	ABO_1611	Electron transport complex protein rnfB, putative; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	Electron transport complex protein rnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.	0.997
rnfB	rnfD	ABO_1610	ABO_1612	Electron transport complex protein rnfB, putative; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	Electron transport complex protein rnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	0.978