STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_0361Conserved hypothetical protein identified by sequencesimilarity; putative; Function unclear. (163 aa)    
Predicted Functional Partners:
ABO_0360
Conserved hypothetical protein.
 
    0.918
yadR
HesB/YadR/YfhF family protein; Required for insertion of 4Fe-4S clusters for at least IspG.
       0.811
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
       0.802
ABO_0606
Peptidase, M23/M37 family; Identified by sequencesimilarity; putative InterPro: Peptidase family M23/M37; Family membership.
 
   
 0.600
ABO_0358
Identified by match to PFAM protein family HMMPF00654 InterPro: Voltage gated chloride channels; Specificity unclear.
       0.595
ABO_1048
Hypothetical protein.
  
     0.490
ABO_0357
Conserved hypothetical protein.
       0.480
algZ
(two-component system sensor protein, alginate biosynthesis) identified by Glimmer2; High confidence in function and specificity.
  
     0.445
ABO_0363
Conserved hypothetical protein.
       0.417
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.