rpsT protein (Alcanivorax borkumensis) - STRING interaction network

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Score

rpsT

30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (88 aa)

Predicted Functional Partners:

rpmB

0.996

rplU

0.996

rplM

0.995

rpmG

0.994

rpmA

0.994

rpmF

0.994

rpsU

0.994

rpsO

0.993

rpsI

0.991

rpsP

0.991

Your Current Organism:

Alcanivorax borkumensis

NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	ABO_0576	ABO_0452	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.997
rplM	rpmA	ABO_0576	ABO_0453	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L27; Identified by sequencesimilarity; putative InterPro: Ribosomal protein L27; High confidence in function and specificity; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplM	rpmB	ABO_0576	ABO_0215	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L28; Identified by sequencesimilarity; putative InterPro: Ribosomal protein L28; Function unclear; Belongs to the bacterial ribosomal protein bL28 family.	0.996
rplM	rpmF	ABO_0576	ABO_1066	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L32; Identified by sequencesimilarity; putative; High confidence in function and specificity; Belongs to the bacterial ribosomal protein bL32 family.	0.996
rplM	rpmG	ABO_0576	ABO_0216	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L33; Identified by sequencesimilarity; putative InterPro: Ribosomal protein L33; Function unclear; Belongs to the bacterial ribosomal protein bL33 family.	0.996
rplM	rpsI	ABO_0576	ABO_0577	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S9; Identified by sequence similarity; putative InterPro: Ribosomal protein S9; High confidence in function and specificity; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO	ABO_0576	ABO_0332	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.994
rplM	rpsP	ABO_0576	ABO_0798	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	(ribosomal protein S16) identified by sequence similarity; putative InterPro: Ribosomal protein S16; High confidence in function and specificity; Belongs to the bacterial ribosomal protein bS16 family.	0.996
rplM	rpsT	ABO_0576	ABO_0456	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.995
rplM	rpsU	ABO_0576	ABO_2060	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S21; Identified by sequencesimilarity; putative InterPro: Ribosomal protein S21; High confidence in function and specificity; Belongs to the bacterial ribosomal protein bS21 family.	0.989
rplU	rplM	ABO_0452	ABO_0576	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplU	rpmA	ABO_0452	ABO_0453	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L27; Identified by sequencesimilarity; putative InterPro: Ribosomal protein L27; High confidence in function and specificity; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplU	rpmB	ABO_0452	ABO_0215	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L28; Identified by sequencesimilarity; putative InterPro: Ribosomal protein L28; Function unclear; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplU	rpmF	ABO_0452	ABO_1066	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L32; Identified by sequencesimilarity; putative; High confidence in function and specificity; Belongs to the bacterial ribosomal protein bL32 family.	0.994
rplU	rpmG	ABO_0452	ABO_0216	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L33; Identified by sequencesimilarity; putative InterPro: Ribosomal protein L33; Function unclear; Belongs to the bacterial ribosomal protein bL33 family.	0.994
rplU	rpsI	ABO_0452	ABO_0577	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S9; Identified by sequence similarity; putative InterPro: Ribosomal protein S9; High confidence in function and specificity; Belongs to the universal ribosomal protein uS9 family.	0.993
rplU	rpsO	ABO_0452	ABO_0332	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.991
rplU	rpsP	ABO_0452	ABO_0798	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	(ribosomal protein S16) identified by sequence similarity; putative InterPro: Ribosomal protein S16; High confidence in function and specificity; Belongs to the bacterial ribosomal protein bS16 family.	0.992
rplU	rpsT	ABO_0452	ABO_0456	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.996
rplU	rpsU	ABO_0452	ABO_2060	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S21; Identified by sequencesimilarity; putative InterPro: Ribosomal protein S21; High confidence in function and specificity; Belongs to the bacterial ribosomal protein bS21 family.	0.992