STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tldDTldD protein; Identified by sequence similarity; putative InterPro: Putative modulator of DNA gyrase; High confidence in function and specificity. (506 aa)    
Predicted Functional Partners:
pmbA
pmbA protein; Identified by sequence similarity;putative InterPro: Putative modulator of DNA gyrase; Function unclear.
 
 
0.930
ABO_0534
Conserved hypothetical protein.
     
 0.837
ABO_0535
Identified by sequencesimilarity; putative InterPro: Carbon-nitrogen hydrolase; Family membership.
  
    0.831
ABO_0537
InterPro: Cyclic nucleotide-binding domain; Function unclear.
       0.812
maf-1
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.811
ABO_0538
Conserved hypothetical protein; (MORN domain protein) identified by match to PFAM protein family HMMPF02493 InterPro: MORN motif The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins. The function of this motif is unknown; conserved hypothetical protein.
       0.775
mreD
Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.
 
     0.642
mreB
Rod shape-determining protein MreB; Identified by sequence similarity; putative InterPro: Cell shape determining protein MreB/Mrl; High confidence in function and specificity.
       0.581
mreC
Rod shape determining protein MreC; Involved in formation and maintenance of cell shape.
       0.581
coae
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
      0.568
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.