STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABO_0537InterPro: Cyclic nucleotide-binding domain; Function unclear. (153 aa)    
Predicted Functional Partners:
anr-2
Transcriptional regulator Anr; Identified by sequencesimilarity; putative InterPro: Cyclic nucleotide-binding domain; Family membership.
  
  
 0.969
crp
Catabolite gene activator Crp; Identified by match to PFAM protein family HMMPF00325 InterPro: Cyclic nucleotide-binding domain; High confidence in function and specificity.
  
  
 
0.924
ABO_1010
Hypothetical protein; InterPro: Cyclic nucleotide-binding domain.
  
  
  0.920
ABO_0435
Unnamed protein product; Specificity unclear; adenylate cyclase family protein identified by Glimmer2; putative InterPro: Guanylate cyclase.
 
 0.852
ABO_0885
Adenylate cyclase PA3217; Specificity unclear.
 
 0.833
tldD
TldD protein; Identified by sequence similarity; putative InterPro: Putative modulator of DNA gyrase; High confidence in function and specificity.
       0.806
ABO_0534
Conserved hypothetical protein.
       0.804
ABO_0535
Identified by sequencesimilarity; putative InterPro: Carbon-nitrogen hydrolase; Family membership.
       0.799
ABO_0538
Conserved hypothetical protein; (MORN domain protein) identified by match to PFAM protein family HMMPF02493 InterPro: MORN motif The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins. The function of this motif is unknown; conserved hypothetical protein.
  
    0.775
maf-1
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.774
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.