Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_0615(Pilin protein family, putative); identify by similarity to PFAM protein family PF00114; Family membership; Belongs to the N-Me-Phe pilin family. (148 aa)    
Predicted Functional Partners:
ABO_0616
Hypothetical protein.
     
 0.790
pilQ
Fimbrial assembly protein pilQ precursor; InterPro: General (type II) secretion pathway (GSP) D protein; Hypothetical protein.
 
   
 0.764
pilD
Leaderpeptidase and N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.690
tapC
Type IV pilus assembly protein TapC; Identified by sequence similarity; Family membership.
 
   
 0.647
pilT
Type IV pili twitching motility protein PilT; Identified by sequence similarity InterPro: Bacterial type II secretion system protein E; Function unclear.
 
   
 0.494
pilM
Type IV fimbrial biogenesis protein PilM.
 
   
 0.488
ABO_0468
Secretion protein putative identifiedby sequence similarity; putative InterPro: Fimbrial protein pilin; High confidence in function and specificity.
 
   
0.462
pilN-2
Type IV pili biogenesis protein PilN.
  
   
 0.431
pilO
Type 4 fimbrial biogenesis protein pilO.
  
   
 0.430
pilB
Type IV fimbrial assembly protein PilB; Identified by sequence similarity and match to PFAM protein family HMMPF00437 InterPro: Bacterial type II secretion system protein E; Family membership.
 
  
 0.418
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.