Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABO_0682Conserved hypothetical protein; Identified by sequencesimilarity; putative. (290 aa)    
Predicted Functional Partners:
plsC2
1-acyl-sn-glycerol-3-phosphate acyltransferase; (plsC) identified by match to TIGR protein family HMMTIGR00530 InterPro: Phospholipid and glycerol acyltransferase (from motifs_6.msf); Family membership.
 
  
 0.970
iscS
Cysteine desulfurase; Identified by sequence similarity; putative identified by match to PFAM potein family HMMPF00266; putative InterPro: Aminotransferase class-V; High confidence in function and specificity.
      0.605
ABO_0681
Hypothetical protein; Function unclear.
       0.540
ABO_0684
Translation elongation factor P identified by match to TIGR protein family HMMTIGR00038; Family membership.
       0.436
ABO_0685
Conserved hypothetical protein; Identified by sequencesimilarity; putative.
       0.434
ABO_0686
Conserved hypothetical protein; Identified by sequencesimilarity; putative InterPro: Rhomboid family.
       0.434
ABO_1647
Transcriptional regulator TetR family identified by match to PFAM protein family HMMPF00440; Family membership.
  
     0.416
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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