STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_0698Conserved hypothetical protein. (262 aa)    
Predicted Functional Partners:
kefB-2
Glutathione-regulated potassium-protonantiporter identifiedby sequence similarity; putative InterPro: Na+/H+ exchanger; High confidence in function and specificity; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.538
glnS
glutaminyl-tRNA synthetase; Identified by sequencesimilarity; putative InterPro: Glutaminyl-tRNA synthetase GlnS; Hypothetical protein.
 
      0.529
ABO_0895
Conserved hypothetical protein; InterPro: Glycosyl transferases group 1.
 
     0.526
ABO_0896
Conserved hypothetical protein; Identified by sequence similarity; putative predicted membrane protein.
 
   
 0.484
ABO_0699
Conserved hypothetical protein.
       0.410
csuC
Type 1 pili usher pathway chaperone CsuC; Identified by match to PFAM protein family HMMPF00345; Specificity unclear.
       0.410
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.