STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fecAFecA-like outer membrane receptor identified by sequence similarity; putative; High confidence in function and specificity. (727 aa)    
Predicted Functional Partners:
hyuB
(N-methylhydantoinase B, hydantoin utilization protein B, putative) identified by sequence similarity; putative identified by match to PFAM protein family HMMPF02538 InterPro: Hydantoinase B/oxoprolinase; Function unclear.
       0.542
ydhD
Glutaredoxin-related protein; conserved hypothetical protein; Belongs to the glutaredoxin family. Monothiol subfamily.
       0.503
ABO_2491
Hypothetical protein.
  
    0.474
tonB2
Ferric siderophore transport system,periplasmicbinding prot; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
   
 
 0.428
ABO_2369
Fe3+-siderophore ABC transporter permease protein; Family membership; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.416
ABO_2368
Probable ATP-binding ABC transporter protein; Family membership.
 
  
 0.411
ABO_2370
Identified by sequence similarity; putative InterPro: Periplasmic binding protein; Family membership.
  
   
 0.406
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.