Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ABO_0723Oxidoreductase; Peroxiredoxin, antioxidant, AhpC/Tsa family, oxidoreductase (acting on NADH or NADPH with a disulfide as acceptor) identified by match to PFAM protein family HMMPF00578 InterPro: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Family membership. (200 aa)    
Predicted Functional Partners:
ahpF
(alkyl hydroperoxide reductase F subunit) identified by sequence similarity; putative InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; High confidence in function and specificity.
  
  
 0.763
ABO_2632
(peroxiredoxin family protein/glutaredoxin, putative); identified by sequencesimilarity; putative InterPro: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Family membership.
  
 0.739
trxB
(thioredoxin reductase; NADP-thioredoxin reductase) identified by sequencesimilarity; putative InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; High confidence in function and specificity.
  
 
 0.599
ABO_0044
AhpC/TSA family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.569
ydhD
Glutaredoxin-related protein; conserved hypothetical protein; Belongs to the glutaredoxin family. Monothiol subfamily.
  
 
 0.557
fur
Transcriptional regulator Fur; Identified by sequence similarity; putative; Family membership; Belongs to the Fur family.
  
  
 0.528
katA
Catalase; Identified by sequence similarity;putative InterPro: Catalase; High confidence in function and specificity.
  
 
 0.522
ABO_0032
Conserved hypothetical protein; Identified by sequence similarity. InterPro: Thioredoxin.
  
 0.515
ABO_0816
Thioredoxin, putative; (trx-1) (thioredoxin) identified by match to PFAM protein family HMMPF00085 InterPro: Thioredoxin; High confidence in function and specificity.
  
 0.515
dsbE
Thiol:disulfide interchange protein DsbE; Identified by sequence similarity; putative InterPro: Periplasmic protein thiol:disulfide oxidoreductase DsbE; High confidence in function and specificity.
  
 0.515
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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