Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABO_0772Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family. (93 aa)    
Predicted Functional Partners:
iscS
Cysteine desulfurase; Identified by sequence similarity; putative identified by match to PFAM potein family HMMPF00266; putative InterPro: Aminotransferase class-V; High confidence in function and specificity.
   
 0.987
tusA
Conserved hypothetical protein; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.
  
  
  0.976
ABO_1299
DsrE/DsrF-like family protein; DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction, identified by sequences imilarity InterPro: DsrE-like protein; Family membership.
 
 
 0.954
ABO_2263
Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
  
 
0.914
perM
Permease PerM putative identified by sequence similarity; putative InterPro: Domain of unknown function DUF20; Specificity unclear.
     
 0.826
ABO_0771
Conserved hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
       0.565
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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