Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ABO_0846(conserved hypothetical protein) identified by sequencesimilarity; putative. (365 aa)    
Predicted Functional Partners:
oadA
Oxaloacetate decarboxylase, alpha subunit; Identified by match to PFAM protein family HMMPF03721 InterPro: HMG-CoA Lyase-like family; High confidence in function and specificity.
       0.732
oadB
Oxaloacetate decarboxylase, beta subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family.
       0.732
oadG
Oxaloacetate decarboxylase, gamma chain; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation.
       0.693
alg8
Alginate biosynthesis protein Alg8; Function unclear.
  
     0.690
ABO_1654
Hypothetical protein.
  
     0.677
algJ
Alginate O-acetylation protein AlgJ; High confidence in function and specificity.
  
     0.578
ABO_1700
Esterified fatty acid cis/trans isomerase family protein identified by sequence similarity; putative; Family membership.
  
     0.510
algK
(alginate biosynthesis regulator AlgK) identified by sequence similarity; putative InterPro: TPR repeat; High confidence in function and specificity.
  
     0.468
algS
Sigma factor algU negative regulatory protein AlgS; Identified by match to PFAM protein family HMMPF03872 RseA_N; High confidence in function and specificity.
  
     0.434
ABO_1687
(hypothetical signal peptide protein) identified by match to PFAM protein family HMMPF03734.
  
     0.415
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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