Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
nasTNitrogen assimilation response regulatory protein; Identified by sequence similarity; putative InterPro: Response regulator receiver domain; High confidence in function and specificity. (216 aa)    
Predicted Functional Partners:
nasS
Identified by sequence similarity; putative; Hypothetical protein.
 
  
 0.920
narB
(probable nitrate reductase large subunit) identified by sequencesimilarity; putative InterPro: Prokaryotic molybdopterin oxidoreductases; Family membership; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.849
nrtC
Nitrate transport ATP-binding protein; Function unclear.
 
  
 0.811
ABO_1088
(NAD(P)H-nitrite reductase family protein identified by sequence similarity; InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Family membership.
 
  
 0.741
ABO_1084
Serine (threonine) protein kinase; (pnk) identified by sequencesimilarity; putative InterPro: Serine/Threonine protein kinase; High confidence in function and specificity.
 
  
 0.648
nrtB
Nitrate ABC transporter permease protein; Identified by sequencesimilarity; putative InterPro: Binding-protein-dependent transport systems inner membrane component; Family membership.
 
   
 0.646
nirB1
(nitrite reductase) identified by sequence similarity; putative InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; High confidence in function and specificity.
 
  
 0.645
ABO_2509
(branched-chain amino acid ABC transporter, putative); identify by sequence similarity; Family membership.
 
 
 0.595
cysG
uroporphyrin-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
  
 0.544
ABO_1985
(ABC transporter, periplasmic substrate-binding protein putative) identified by sequence similarity; putative; Family membership.
  
 
 0.538
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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