STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABO_0887Hypothetical protein. (212 aa)    
Predicted Functional Partners:
ABO_2183
Mercuric reductase, putative; (soluble pyridine nucleotide transhydrogenase) identified by sequencesimilarity; putative InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase belongs to the class-i of pyridine nucleotide- disulfide oxidoreductase family; High confidence in function and specificity.
 
     0.714
ABO_0886
Alcohol/choline dehydrogenase; Similar to: SP:Q00593 SP:P17444 and SP:P54223; identified by sequence similarity; identified by match to PFAM protein families HMMPF00732 and HMMPF05199; putative InterPro: Glucose-methanol-choline (GMC) oxidoreductase; Specificity unclear.
 
     0.621
ABO_1813
Conserved hypothetical protein.
 
     0.461
ABO_0888
Conserved hypothetical protein; Identified by sequencesimilarity; putative InterPro: HNH nuclease.
       0.445
ABO_1008
Uncharacterized protein conserved in bacteria.
  
     0.429
ABO_1812
Conserved hypothetical protein; InterPRO: Uncharacterized BCR (DUF703).
 
    0.408
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.