Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
wzbLow molecular weight protein-tyrosine-phosphatase; Wzb (protein-tyrosine-phosphatase) identified by match to PFAM protein family HMMPF01451; High confidence in function and specificity; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (98 aa)    
Predicted Functional Partners:
wzc
Putative tyrosine-protein kinase Wzc; Family membership; deleted EC_number 2.7.1.112.
 
 
 0.951
wza
(polysaccharide export protein putative) identified by sequencesimilarity; putative InterPro: Polysaccharide export protein; Specificity unclear.
 
  
 0.936
pt
Pt identified by match to PFAM protein family HMMPF01451 InterPro: Low molecular weight phosphotyrosine protein phosphatase; High confidence in function and specificity.
     
  0.900
ABO_0904
Conserved hypothetical protein; Identified by sequence similarity.
     
 0.662
ABO_2088
Ferric iron reductase protein, putative; (penicillin-binding protein 2) identified by match to PFAM protein family HMMPF00905; High confidence in function and specificity.
  
     0.485
wbpO
(capsular polysaccharide biosynthesis protein/UDP-glucose dehydrogenase) identified by match to PFAM protein family HMMPF00984 InterPro: UDP-glucose/GDP-mannose dehydrogenase family The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyze the NAD-dependent 2-fold oxidation of an alcholol to an acid without the release of an aldehyde intermediate; Family membership.
     
 0.443
csuC
Type 1 pili usher pathway chaperone CsuC; Identified by match to PFAM protein family HMMPF00345; Specificity unclear.
  
   
 0.414
acr3
Arsenical pump membrane protein ACR3; InterPro: Sodium bile acid symporter; conserved hypothetical protein.
  
  
 0.404
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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