STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABO_0929Transporter sodium/sulfate symporter family, identified by match to PFAM protein family HMMPF03600, TMHMM: reporting 12 transmembrane helices; Family membership. (590 aa)    
Predicted Functional Partners:
cysC;
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
 
  
 0.759
mnhAB
Multisubunit Na+/H+ antiporter; Probable Na(+)/H(+) antiporter subunit A/B, NADH/Ubiquinone/plastoquinone (complex I), NADH-Ubiquinone/plastoquinone (complex I), various chains,2a6301s01: monovalent cation:proton antiporter; High confidence in function and specificity.
  
  
 0.654
cysQ
Inositol 1-phosphatase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
 
  
 0.526
nhaP
NhaP-type Na+/H+ and K+/H+ antiporters; Identified by match to PFAM protein family HMMPF04290 InterPro: Na+/H+ exchanger; Family membership.
 
  
 0.525
ABO_1512
Sulfate permease protein; Identified by match to PFAM protein family HMMPF04235 InterPro: Sulfate transporter; Family membership.
  
 
 0.505
trkA
(potassium uptake protein TrkA) identified by match to PFAM protein family HMMPF02080 InterPro: KTN NAD-binding domain; Family membership.
  
  
 0.500
fumA
Fumarate hydratase, putative; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.487
ABO_2433
Conserved hypothetical protein, signal transduction protein containing a membrane domain, an EAL and a GGDEF domain and PAS/PAC domain.
     
 0.477
ABO_2738
(sodium/hydrogen exchanger family protein) identified by match to PFAM protein family HMMPF03471 InterPro: Na+/H+ exchanger; Family membership; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
 
   
 0.471
ABO_2155
(two-component protein: Na-solute symporter/sensory box histidinekinase/response regulator putative) identified by match to PFAM protein family HMMPF02518 and HMMPF00072; putative InterPro: Sodium:solute symporter family TMHMM: reportin 12 transmembrane helices; Family membership.
  
  
 0.468
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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