Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ABO_0941(glycosyl transferase group 2 family protein) identified by match to PFAM protein family HMMPF00535 InterPro: Glycosyl transferase family 2 Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids; Family membership. (274 aa)    
Predicted Functional Partners:
ABO_0943
Conserved hypothetical protein.
  
 0.887
ABO_0942
Glycosyl transferase, putative; Identified by sequencesimilarity; putative InterPro: Glycosyl transferase family 2; Hypothetical protein.
 
  
 0.838
ABO_0925
Sugar transferase, putative; Identified by match to PFAM protein family HMMPF02397 This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways; Family membership.
  
 0.739
ABO_0918
(glycosyl transferase group 2 family protein) identified by match to TIGR protein family HMMTIGR01556 InterPro: Glycosyl transferase family 2; Family membership.
 
     0.543
aspC
(aspartate aminotransferase, transaminase A) identified by sequence similarity; putative identified by match to PFAM protein family HMMPF00155 InterPro: Aminotransferases class-I; High confidence in function and specificity.
       0.516
galE-2
(UDP-glucose-4-epimerase),(Galactowaldenase),. identified by match to TIGR protein family HMMTIGR01746 InterPro: NAD dependent epimerase/dehydratase family; High confidence in function and specificity; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.453
ugd1
(GDP-mannose 6-dehydrogenase) identified by sequence similarity; putative InterPro: UDP-glucose/GDP-mannose dehydrogenase family; High confidence in function and specificity.
 
  
 0.442
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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