Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABO_0958Conserved hypothetical protein; Identified by sequencesimilarity; putative. (345 aa)    
Predicted Functional Partners:
ABO_0957
acyl-CoA dehydrogenase putative identified by match to PFAM protein family HMMPF00441 InterPro: Acyl-CoA dehydrogenase; Specificity unclear.
 
 0.992
ABO_2533
(acyl-CoA dehydrogenase, putative) identified by sequencesimilarity; putative InterPro: Acyl-CoA dehydrogenase; High confidence in function and specificity.
 
 0.958
acdA
acyl-CoA dehydrogenase; Identified by sequencesimilarity; putative InterPro: Acyl-CoA dehydrogenase; Family membership.
 
 
 0.908
ABO_0988
acyl-CoA dehydrogenase; Identified by sequencesimilarity; putative InterPro: Acyl-CoA dehydrogenase; Family membership.
 
 
 0.879
ABO_0959
Oxidoreductase (short-chaindehydrogenase/reductase family) identified by match to PFAM protein family HMMPF00106 InterPro: Short-chain dehydrogenase/reductase (SDR) superfamily; Family membership.
 
 0.829
ABO_0956
Phosphoglycerate mutase, putative; (phosphoglycerate mutase family protein) identified by match to TIGR protein family HMMTIGR00249; putative InterPro: Phosphoglycerate mutase family; Family membership.
 
    0.824
ABO_0571
acyl-CoA dehydrogenase identified by sequencesimilarity; putative InterPro: Acyl-CoA dehydrogenase; Specificity unclear.
 
 
 0.812
ABO_2662
acyl-CoA dehydrogenase; Family membership.
 
 
 0.578
ABO_0960
Oxidoreductase (acting on the CH-OH group of donors with NAD+ or NADP+ as acceptor) identified by sequencesimilarity; putative InterPro: Short-chain dehydrogenase/reductase (SDR) superfamily; Family membership.
 
 0.538
ABO_1772
InterPro: Acyl-CoA dehydrogenase pae:PA4435; Function unclear.
 
 
 0.532
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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