STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
accDAcetyl-CoA carboxylase; Identified by sequencesimilarity; putative InterPro: Carboxyl transferase family; High confidence in function and specificity. (536 aa)    
Predicted Functional Partners:
accA
acetyl-CoA carboxylase; Identified by match to TIGR protein family HMMTIGR00514 InterPro: Carbamoyl-phosphate synthase; High confidence in function and specificity.
 0.999
accC,
acetyl-CoA carboxylase, biotin carboxylase; Identified by match to TIGR protein family HMMTIGR00514 InterPro: Carbamoyl-phosphate synthase; High confidence in function and specificity.
 0.989
ech2
(enoyl-CoA hydratase/isomerase FadB1x) identified by sequence similarity; putative InterPro: Enoyl-CoA hydratase/isomerase; High confidence in function and specificity.
 
 0.974
uahA
Urea carboxylase/allophanate hydrolase; Urea carboxylase; urease (ATP-hydrolysing); urea amidolyase/allophanate hydrolase [EC:6.3.4.6 3.5.1.54] identified by sequence similarity; putative InterPro: DUF183; Family membership.
 
 0.974
ABO_0988
acyl-CoA dehydrogenase; Identified by sequencesimilarity; putative InterPro: Acyl-CoA dehydrogenase; Family membership.
  
 
 0.960
accC
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 
 0.915
ABO_0991
Conserved hypothetical protein.
 
  
 0.864
ABO_0990
Oxidoreductase identified by match to TIGR protein family HMMTIGR01500 InterPro: Short-chain dehydrogenase/reductase (SDR) superfamily; Family membership.
 
 
 0.854
mvaB
hydroxymethylglutaryl-CoA lyase; Identified by sequence similarity; putative InterPro: HMG-CoA Lyase-like family; High confidence in function and specificity; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
 0.773
ABO_1238
enoyl-CoA hydratase/isomerase, putative; Identified by match to PFAM protein family HMMPF00378, putative InterPro: Enoyl-CoA hydratase/isomerase; High confidence in function and specificity.
 
 0.706
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.