STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_1042Identified by match to PFAM protein family HMMPF03009 InterPro: Glycerophosphoryl diester phosphodiesterase; conserved hypothetical protein. (283 aa)    
Predicted Functional Partners:
ABO_0426
Glycerophosphoryl diester phosphodiesterase precursor; Function unclear.
     
 0.921
glpD
Glycerol-3-phosphate dehydrogenase; Identified by match to PFAM protein family HMMPF01266 InterPro: D-amino acid oxidase; High confidence in function and specificity.
 
 
 0.727
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.704
ABO_1043
Conserved hypothetical protein.
  
    0.555
ABO_1407
Sugar kinase, putative; (sugar kinase) identified by sequence similarity; putative InterPro: Carbohydrate kinase FGGY family; Family membership.
  
   
 0.424
pstA
Phosphate ABC transporter permease protein; Identified by sequence similarity; putative InterPro: Binding-protein-dependent transport systems inner membrane component; High confidence in function and specificity.
  
  
 0.415
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.