STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_1111(tesA)(acyl-CoA thioesterase II) identified by match to PFAM protein family HMMPF02551; High confidence in function and specificity. (261 aa)    
Predicted Functional Partners:
ABO_1112
Acyltransferase, putative; Identified by match to TIGR protein family HMMTIGR00530 InterPro: Phospholipid and glycerol acyltransferase (from motifs_6.msf); Family membership.
 
     0.848
ABO_2625
Conserved hypothetical protein.
  
    0.642
ABO_2153
Conserved hypothetical protein.
  
     0.552
gpmA-2
Phosphoglycerate mutase; Identified by match to TIGR protein family HMMTIGR00249; putative InterPro: Phosphoglycerate mutase family; Family membership.
  
    0.540
ABO_1110
Phosphoglycerol transferase; (conserved hypothetical protein) identified by match to PFAM protein family HMMPF04185 InterPro: Sulfatase.
       0.487
ABO_1719
(MaoC domain protein, putative) identified by match to PFAM protein family HMMPF01575 InterPro: MaoC-like dehydratase domain; Family membership.
  
 
 0.486
ABO_2404
Identified by match to PFAM protein family HMMPF00106 InterPro: Short-chain dehydrogenase/reductase (SDR) superfamily; Family membership; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.472
ABO_0300
Conserved hypothetical protein.
  
     0.420
plsB
Glycerol-3-phosphate O-acyltransferase; Identified by match to TIGR protein family HMMTIGR00530 InterPro: Phospholipid and glycerol acyltransferase (from motifs_6.msf); High confidence in function and specificity; Belongs to the GPAT/DAPAT family.
 
  
 0.420
ABO_1581
Conserved hypothetical protein; Identified by match to PFAM protein family HMMPF01734.
  
    0.408
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.