STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
estCInterPro: Carboxylesterases type-B; High confidence in function and specificity. (505 aa)    
Predicted Functional Partners:
gmk-2
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
 
  0.649
estA
(lipase/esterase family protein) identified by sequence similarity; putative InterPro: Esterase/lipase/thioesterase/carboxlesterase family active site; High confidence in function and specificity.
 
   
 0.636
estB
(lipase/esterase family protein) identified by sequence similarity; InterPro: Esterase/lipase/thioesterase/carboxylesterase family active site; High confidence in function and specificity.
 
   
 0.619
ABO_2454
(lipase/esterase family protein) identified by sequence similarity; InterPro: Esterase/lipase/thioesterase/carboxlesterase family active site; High confidence in function and specificity.
 
   
 0.607
ABO_2108
(lipase/esterase family protein) identified by sequence similarity; InterPro: Esterase/lipase/thioesterase/carboxlesterase family active site; High confidence in function and specificity.
 
   
 0.600
rpsA
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
 
  0.595
hrpA
ATP-dependent helicase HrpA; Identified by sequence similarity; putative InterPro: DEAD/DEAH box helicase; Family membership.
    
 0.594
bolA
bolA protein; Identified by sequence similarity; putative InterPro: BolA-like protein; High confidence in function and specificity; Belongs to the BolA/IbaG family.
       0.587
ABO_1197
Carboxylic ester hydrolases identified by sequencesimilarity; putative InterPro: Alpha/beta hydrolase fold; Family membership.
  
  
 0.576
ABO_1253
(conserved hypothetical protein containing rhodanese-like domain) identified by match to PFAM protein family HMMPF00581 InterPro: Rhodanese/cdc25 fold; Belongs to the UPF0176 family.
       0.541
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.