Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABO_1253(conserved hypothetical protein containing rhodanese-like domain) identified by match to PFAM protein family HMMPF00581 InterPro: Rhodanese/cdc25 fold; Belongs to the UPF0176 family. (317 aa)    
Predicted Functional Partners:
ABO_0230
Glutathione S-transferase family protein identified by sequencesimilarity; putative InterPro: Glutathione S-transferase N terminus; Family membership.
     0.921
bolA
bolA protein; Identified by sequence similarity; putative InterPro: BolA-like protein; High confidence in function and specificity; Belongs to the BolA/IbaG family.
       0.825
modA
(molybdate ABC transporter periplasmic molybdate-binding protein) identified by match to TIGR protein family HMMTIGR01256; Family membership.
       0.643
modB
Molybdate ABC transporter permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.643
modC
Molybdate ABC transporter ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.
       0.643
estC
InterPro: Carboxylesterases type-B; High confidence in function and specificity.
       0.541
rluA
Ribosomal large subunit pseudouridine synthase A; (pseudouridylate synthase)(uracil hydrolyase); High confidence in function and specificity.
      0.534
rluC
Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
 
    0.423
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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