Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABO_1302 | arsA | ABO_1302 | ABO_1301 | Hypothetical protein predicted by Glimmer/Critica. | Putative arsenical pump-driving ATPase (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) InterPro: Anion-transporting ATPase; Specificity unclear. | 0.955 |
ABO_1302 | cstA | ABO_1302 | ABO_1303 | Hypothetical protein predicted by Glimmer/Critica. | Carbon starvation protein CstA; Identified by sequencesimilarity; putative InterPro: Carbon starvation protein CstA; High confidence in function and specificity. | 0.969 |
ABO_1302 | gacA | ABO_1302 | ABO_1304 | Hypothetical protein predicted by Glimmer/Critica. | DNA-binding response regulator GacA; Identified by sequence similarity; putative InterPro: Response regulator receiver domain; Specificity unclear. | 0.455 |
arsA | ABO_1302 | ABO_1301 | ABO_1302 | Putative arsenical pump-driving ATPase (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) InterPro: Anion-transporting ATPase; Specificity unclear. | Hypothetical protein predicted by Glimmer/Critica. | 0.955 |
arsA | cstA | ABO_1301 | ABO_1303 | Putative arsenical pump-driving ATPase (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) InterPro: Anion-transporting ATPase; Specificity unclear. | Carbon starvation protein CstA; Identified by sequencesimilarity; putative InterPro: Carbon starvation protein CstA; High confidence in function and specificity. | 0.959 |
arsA | gacA | ABO_1301 | ABO_1304 | Putative arsenical pump-driving ATPase (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) InterPro: Anion-transporting ATPase; Specificity unclear. | DNA-binding response regulator GacA; Identified by sequence similarity; putative InterPro: Response regulator receiver domain; Specificity unclear. | 0.455 |
cstA | ABO_1302 | ABO_1303 | ABO_1302 | Carbon starvation protein CstA; Identified by sequencesimilarity; putative InterPro: Carbon starvation protein CstA; High confidence in function and specificity. | Hypothetical protein predicted by Glimmer/Critica. | 0.969 |
cstA | arsA | ABO_1303 | ABO_1301 | Carbon starvation protein CstA; Identified by sequencesimilarity; putative InterPro: Carbon starvation protein CstA; High confidence in function and specificity. | Putative arsenical pump-driving ATPase (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) InterPro: Anion-transporting ATPase; Specificity unclear. | 0.959 |
cstA | gacA | ABO_1303 | ABO_1304 | Carbon starvation protein CstA; Identified by sequencesimilarity; putative InterPro: Carbon starvation protein CstA; High confidence in function and specificity. | DNA-binding response regulator GacA; Identified by sequence similarity; putative InterPro: Response regulator receiver domain; Specificity unclear. | 0.457 |
gacA | ABO_1302 | ABO_1304 | ABO_1302 | DNA-binding response regulator GacA; Identified by sequence similarity; putative InterPro: Response regulator receiver domain; Specificity unclear. | Hypothetical protein predicted by Glimmer/Critica. | 0.455 |
gacA | arsA | ABO_1304 | ABO_1301 | DNA-binding response regulator GacA; Identified by sequence similarity; putative InterPro: Response regulator receiver domain; Specificity unclear. | Putative arsenical pump-driving ATPase (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) InterPro: Anion-transporting ATPase; Specificity unclear. | 0.455 |
gacA | cstA | ABO_1304 | ABO_1303 | DNA-binding response regulator GacA; Identified by sequence similarity; putative InterPro: Response regulator receiver domain; Specificity unclear. | Carbon starvation protein CstA; Identified by sequencesimilarity; putative InterPro: Carbon starvation protein CstA; High confidence in function and specificity. | 0.457 |