STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cheB-2Protein-glutamate methylesterase; Identified by sequencesimilarity; putative InterPro: CheB methylesterase; High confidence in function and specificity. (193 aa)    
Predicted Functional Partners:
cheR-2
(chemotaxis protein methyltransferase CheR-like) identified by sequence similarity; putative InterPro: CheR-type MCP methyl-transferase; High confidence in function and specificity.
  
 0.998
cheR
(methyltransferase CheR-like) identified by match to PFAM protein family HMMPF00515; High confidence in function and specificity.
  
 0.995
chpA
ChpA two-component hybrid sensor and regulator, putative identified by match to TIGR protein family HMMTIGR01387 InterPro: Histidine kinase C-terminal still frameshift probable component of chemotactic signal transduction system; Specificity unclear.
 
 
 0.977
ABO_1307
Sensor histidine kinase/respose regulator, contains HisKA, HATPase_c and two Response_reg receiver domains; identified by sequencesimilarity; putative InterPro: Histidine kinase C-terminal; Family membership.
 
 
 0.967
ABO_1311
Sensory box protein/response regulator identified by sequencesimilarity; putative; Function unclear.
 
 
 0.932
ABO_1309
Sensory box protein/response regulator; Identified by sequencesimilarity; putative InterPro: Response regulator receiver domain; High confidence in function and specificity.
 
 
 
 0.892
ABO_2433
Conserved hypothetical protein, signal transduction protein containing a membrane domain, an EAL and a GGDEF domain and PAS/PAC domain.
 
 0.874
gspE
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
     
 0.826
ABO_0106
Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation.
 
 
 0.810
gspF
Involved in a general secretion pathway (GSP) for the export of proteins. Belongs to the GSP F family,identified by sequence similarity. InterPro: Bacterial type II secretion system protein; Family membership.
       0.788
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.