Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABO_1396Hypothetical protein. (400 aa)    
Predicted Functional Partners:
ABO_1397
Acyltransferase, putative; Identified by match to TIGR protein family HMMTIGR00530, putative InterPro: Phospholipid and glycerol acyltransferase (from motifs_6.msf); Family membership.
       0.563
ABO_1398
Conserved hypothetical protein.
       0.563
ABO_1000
Conserved hypothetical protein.
  
     0.542
ABO_1553
Conserved hypothetical protein; Function unclear.
  
     0.513
ABO_1002
Membrane protein, putative; Identified by sequence similarity; putative InterPro: HMGCR/Patched 5TM box; conserved hypothetical protein.
  
     0.481
ABO_0467
Pilin biogenesis related protein.
  
     0.462
ABO_1519
Hypothetical protein.
  
     0.439
ABO_0999
Conserved hypothetical protein.
  
     0.432
ABO_0360
Conserved hypothetical protein.
  
     0.430
ABO_1269
Putative methyltransferase; Identified by match to PFAM protein family HMMPF02390 InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein.
  
     0.404
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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