STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_1416Conserved hypothetical protein. (370 aa)    
Predicted Functional Partners:
nrdA
Ribonucleoside reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.989
ABO_0786
Conserved hypothetical protein.
 
     0.516
ABO_1417
Conserved hypothetical protein; Uncharacterized protein, possibly involved in aromatic compounds catabolism (translation initiation factor, probable) identified by match to TIGR protein family HMMTIGR00369.
       0.495
ABO_0940
Hypothetical protein; InterPro: Sulfotransferase.
  
     0.451
ABO_0181
Conserved hypothetical protein; Predicted metal-dependent hydrolase.
  
     0.419
ABO_0197
Metal-dependent hydrolase, putative; Predicted metal-dependent hydrolase; conserved hypothetical protein.
  
     0.400
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.