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rsmC protein (Alcanivorax borkumensis) - STRING interaction network
"rsmC" - Ribosomal RNA large subunit methyltransferase G in Alcanivorax borkumensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rsmCRibosomal RNA large subunit methyltransferase G; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA (416 aa)    
Predicted Functional Partners:
rlmL
Ribosomal RNA large subunit methyltransferase K/L; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA; Belongs to the methyltransferase superfamily. RlmKL family (704 aa)
     
 
  0.569
gapA
Identified by sequence similarity InterPro- Glyceraldehyde 3-phosphate dehydrogenase; High confidence in function and specificity; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (479 aa)
 
          0.540
ABO_1586
Ribosomal RNA small subunit methyltransferase C; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family (325 aa)
 
   
0.535
hrpB
HrpB protein; Identified by sequencesimilarity; putative InterPro- DEAD/DEAH box helicase; High confidence in function and specificity (814 aa)
     
      0.483
sun;
tRNA and rRNA cytosine-C5-methylase, putative; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (447 aa)
   
   
  0.478
ruma
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA (445 aa)
   
   
  0.465
ABO_2563
Ribosomal RNA small subunit methyltransferase D; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle (210 aa)
           
  0.446
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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