STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_1482MaoC domain protein, putative; Identified by match to PFAM protein family HMMPF01575 InterPro: MaoC-like dehydratase domain; Family membership. (153 aa)    
Predicted Functional Partners:
fadE-1
acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMMPF02770 InterPro: Acyl-CoA dehydrogenase; Hypothetical protein.
 
  0.625
ABO_0954
Oxidoreductase (acting on the CH-OH group of donors with NAD+ or NADP+ as acceptor) family identified by sequence similarity; putative InterPro: Short-chain dehydrogenase/reductase (SDR) superfamily; Family membership.
 
 0.595
ABO_1483
Hydrolase (acting on ester bonds) identified by match to TIGR protein family HMMTIGR01738 InterPro: Alpha/beta hydrolase fold; Family membership.
  
 
 0.588
adhB
Alcohol dehydrogenase; Identified by sequencesimilarity; putative InterPro: Zinc-containing alcohol dehydrogenase superfamily; Family membership.
 
 
 0.586
ABO_1484
Conserved hypothetical protein; Identified by match to TIGR protein family HMMTIGR01738; Family membership.
  
 
  0.583
fadB-2
(fatty oxidation complex alpha subunit, enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase) identified by sequence similarity; putative InterPro: enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase; Family membership.
  
 0.567
fadB2
Fatty oxidation complex; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.567
katA
Catalase; Identified by sequence similarity;putative InterPro: Catalase; High confidence in function and specificity.
   
 0.558
eno-2
(enoyl-CoA hydratase/isomerase family protein) identified by match to PFAM protein family HMMPF00378 InterPro: Enoyl-CoA hydratase/isomerase; High confidence in function and specificity.
 
 0.508
ABO_0957
acyl-CoA dehydrogenase putative identified by match to PFAM protein family HMMPF00441 InterPro: Acyl-CoA dehydrogenase; Specificity unclear.
 
  0.457
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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