Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_1576Conserved hypothetical protein. (239 aa)    
Predicted Functional Partners:
ABO_1575
Conserved hypothetical protein.
 
    
0.878
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.825
purM
Identified by sequencesimilarity; putative InterPro: Phosphoribosylformylglycinamidine cyclo-ligase; High confidence in function and specificity.
       0.810
ABO_2030
(conserved hypothetical protein) identified by Glimmer2; putative.
  
     0.678
ABO_1572
Conserved hypothetical protein; Identified by sequencesimilarity; putative.
 
    0.623
ABO_2601
Conserved hypothetical protein; Identified by sequencesimilarity; putative; Belongs to the UPF0149 family.
  
    0.544
ftsK
Cell division protein FtsK; Identified by sequence similarity; putative InterPro: FtsK/SpoIIIE family This domain contains a putative ATP binding P-loop motif. It is found in the FtsK cell division protein from E. coli FTSK_ECOLI and the stage III sporulation protein E SpoIIIE; Family membership.
    
 
 0.509
ABO_2503
Oxidoreductase, ado/keto reductase family; Identified by match to PFAM protein family HMMPF00248 InterPro: Aldo/keto reductase family; Family membership.
  
     0.498
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.473
ABO_2012
Conserved hypothetical protein.
  
     0.465
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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