Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABO_1587 | amiB | ABO_1587 | ABO_2206 | Soluble lytic transglycosylase, putative; Identified by sequencesimilarity; putative InterPro: SLT domain murein-degrading enzyme; High confidence in function and specificity. | N-acetylmuramoyl-L-alanine amidase; Identified by sequencesimilarity; putative InterPro: Cell wall hydrolase/autolysin; High confidence in function and specificity. | 0.408 |
| ABO_1587 | mltF | ABO_1587 | ABO_0784 | Soluble lytic transglycosylase, putative; Identified by sequencesimilarity; putative InterPro: SLT domain murein-degrading enzyme; High confidence in function and specificity. | Periplasmic binding domain/transglycosylase SLTdomain fusion; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding prot [...] | 0.464 |
| ABO_1587 | rsmC-2 | ABO_1587 | ABO_1586 | Soluble lytic transglycosylase, putative; Identified by sequencesimilarity; putative InterPro: SLT domain murein-degrading enzyme; High confidence in function and specificity. | Conserved hypothetical protein; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family. | 0.555 |
| amiB | ABO_1587 | ABO_2206 | ABO_1587 | N-acetylmuramoyl-L-alanine amidase; Identified by sequencesimilarity; putative InterPro: Cell wall hydrolase/autolysin; High confidence in function and specificity. | Soluble lytic transglycosylase, putative; Identified by sequencesimilarity; putative InterPro: SLT domain murein-degrading enzyme; High confidence in function and specificity. | 0.408 |
| amiB | mltF | ABO_2206 | ABO_0784 | N-acetylmuramoyl-L-alanine amidase; Identified by sequencesimilarity; putative InterPro: Cell wall hydrolase/autolysin; High confidence in function and specificity. | Periplasmic binding domain/transglycosylase SLTdomain fusion; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding prot [...] | 0.426 |
| mltF | ABO_1587 | ABO_0784 | ABO_1587 | Periplasmic binding domain/transglycosylase SLTdomain fusion; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding prot [...] | Soluble lytic transglycosylase, putative; Identified by sequencesimilarity; putative InterPro: SLT domain murein-degrading enzyme; High confidence in function and specificity. | 0.464 |
| mltF | amiB | ABO_0784 | ABO_2206 | Periplasmic binding domain/transglycosylase SLTdomain fusion; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding prot [...] | N-acetylmuramoyl-L-alanine amidase; Identified by sequencesimilarity; putative InterPro: Cell wall hydrolase/autolysin; High confidence in function and specificity. | 0.426 |
| rsmC-2 | ABO_1587 | ABO_1586 | ABO_1587 | Conserved hypothetical protein; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family. | Soluble lytic transglycosylase, putative; Identified by sequencesimilarity; putative InterPro: SLT domain murein-degrading enzyme; High confidence in function and specificity. | 0.555 |