Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABO_1591(alpha/beta-hydrolase protein family, putative) identified by sequence similarity; putative InterPro: Esterase/lipase/thioesterase family active site; Family membership. (228 aa)    
Predicted Functional Partners:
ABO_1592
(ttgR) (transcriptional regulator TtgR) identifiedby sequence similarity; putative InterPro: Bacterial regulatory proteins TetR family; Family membership.
       0.800
ABO_1593
Hypothetical protein.
       0.741
ABO_0940
Hypothetical protein; InterPro: Sulfotransferase.
    
 0.733
ABO_1594
Conserved hypothetical protein; Identified by match to PFAM protein family HMMPF04055 InterPro: Domain of unknown function DUF85.
 
     0.613
thiD
Adenine phosphoribosyltransferase; (phosphomethylpyrimidine kinase) identified by sequencesimilarity; putative; High confidence in function and specificity.
  
    0.427
ABO_1595
NAD-glutamate dehydrogenase; Region start changed from 1824508 to 1824409 (-99 bases).
 
     0.424
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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