STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABO_1688TonB-dependent siderophore receptor; Function unclear. (498 aa)    
Predicted Functional Partners:
fhuA
Ferrichrome-iron receptor precursor (Ferric hydroxamate uptake) (Ferric hydroxamate receptor)., TonB-dependent siderophore receptor, TonB-dependent Receptor Plug Domain, TonB-siderophor: TonB-dependent siderophore receptor; High confidence in function and specificity.
  
  
 0.674
fpvB
Ferripyoverdine receptor precursor; Identified by sequence similarity; putative InterPro: TonB-dependent receptor protein; Family membership.
  
  
 0.652
fpvA
Ferripyoverdine receptor precursor; Identified by sequence similarity; putative Interpro:; Family membership.
  
  
 0.627
tonB2
Ferric siderophore transport system,periplasmicbinding prot; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.623
foxA
(ferrioxamine receptor putative) identified by sequence similarity; putative InterPro: TonB-dependent receptor protein; High confidence in function and specificity.
  
  
 0.617
bfrA
bfrA; exogenous ferric siderophore receptor,homologf of fepA (Abo_; Hypothetical protein.
       0.608
fhuE
Outer membrane ferric siderophore receptor identified by sequencesimilarity; putative InterPro: TonB-dependent receptor protein; High confidence in function and specificity.
  
  
 0.565
ABO_1694
Conserved hypothetical protein.
 
  
 0.548
tonB
TonB; Periplasmic protein TonB, links inner and outer membranes; Family membership.
  
 
 0.536
ABO_0757
Conserved hypothetical protein, has certain similarity to proline-rich C-terminus of TolA (PA0971) of Pseudomonas aeruginosa PAO1.
  
 
 0.536
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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